• Membrane Protein Structure Prediction using Sparse NMR Restraints
• Protein Structure Prediction using Fold Templates

Soumya Ganguly;Brian E. Weiner, Jens Meiler
Membrane Protein Structure Determination using Paramagnetic Tags (2011) Structure

Nils Woetzel;Mert KarakaS, Rene Staritzbichler, Ralf Mueller, Brian E. Weiner, Jens Meiler
BCL::Score-Knowledge Based Energy Potentials for Ranking Protein Models Represented by Idealized Secondary Structure Elements (2012) PLOS One

Mert Karakas;Nils Woetzel, Rene Staritzbichler, Nathan Alexander, Brian E. Weiner, Jens Meiler
BCL::Fold - De Novo Prediction of Complex and Large Protein Topologies by Assembly of Secondary Structure Elements (2012) PLOS One

Brian E. Weiner;Nils Woetzel, Mert Karakas, Nathan Alexander, Jens Meiler
BCL::MP-Fold: Folding Membrane Proteins through Assembly of Transmembrane Helices (2013) Structure

Brian E. Weiner;Nathan Alexander, Louesa R. Akin, Nils Woetzel, Mert Karakas, and Jens Meiler
BCL::Fold protein topology determination from limited NMR restraints (2013) Proteins

Daniel Putnam;Brian E. Weiner, Nils Woetzel, Edward W. Lowe Jr., Jens Meiler
BCL::SAXS: GPU accelerated Debye method for computation of small angle X-ray scattering profiles (2015) Proteins

Bian Li;Jeffrey Mendenhall, Elizabeth Dong Nguyen, Brian E. Weiner, Axel Fischer, and Jens Meiler
Accurate Prediction of Contact Numbers for Multi-Spanning Helical Membrane Proteins (2016) Journal of Chemical Information and Modeling

Sten Heinze;Daniel K. Putnam, Axel W. Fischer, Tim Kohlmann, Brian E. Weiner, and Jens Meiler
CASP10-BCL::Fold efficiently samples topologies of large proteins (2015) Proteins

Li B;Mendenhall J, Nguyen ED, Weiner BE, Fischer AW, Meiler J.
Improving prediction of helix-helix packing in membrane proteins using predicted contact numbers as restraints (2017) Proteins

Xia Y;Fischer AW, Teixeira P, Weiner B, Meiler J.
Integrated Structural Biology for ?-Helical Membrane Protein Structure Determination. (2018) Structure

Teixeira PL;Mendenhall JL, Heinze S, Weiner B, Skwark MJ, Meiler J.
Membrane protein contact and structure prediction using co-evolution in conjunction with machine learning. (2017) PLoS One

Axel Fischer;Nathan Alexander, Nils Woetzel, Mert Karakas , Brian E. Weiner, Jens Meiler
BCL::MP Fold: Membrane protein structure prediction guided by EPR restraints (2015) Proteins